Project

Novel Tools for Targeting Complex Microbiomes

Publisher

Supervisor

Location

Greater Copenhagen area

The purpose of this project is to develop novel tools for microbiome analysis.

We currently experience a revolution that targets the microbiome for drug discovery and therapeutic intervention. What we need are better tools to study microbiomes, the microbial communities that colonize our human bodies, as well as animals, the environment or food items. 

You may choose to either work on a project that mainly focusses on 1) the development of better laboratory approaches for sample preparation, DNA isolation and next-generation sequencing, or 2) bioinformatics analyses to characterize the taxonomic and functional composition of complex microbiomes. The first project is ideally suited for students who enjoy laboratory work, and the second project suits bioinformatics students who have an interest and potentially already some skills in the analysis of metagenomics and/or whole genome sequencing (WGS) data. 

You will be part of a team that includes clinicians, veterinarians, molecular biologists and bioinformaticians. Techniques can include DNA extraction, PCR, creating metagenomic libraries, Next-generation sequencing (incl. Nanopore sequencing), classical microbiological techniques, DNA sequence analyses, and other.

Overall, the main research areas of our group are: the microbiome, genomics, infectious diseases, novel antimicrobials, antibiotic resistance, microbial ecology, microbial interactions, evolution, microbiology, molecular biology, single-cell analysis, epidemiology and global surveillance. 


For further information, just get in touch: sjpa@food.dtu.dk


Feel free to also check us out at:

http://www.food.dtu.dk/english/Research/Genomic-Epidemiology

http://www.compare-europe.eu/

http://www.genomicepidemiology.org/

http://www.dtu.dk/english/service/phonebook/person?id=28182&tab=1

 


Search in postings
Contact

Company / Organization

DTU Fødevareinstituttet

Name

Sünje Johanna Pamp

Position

Lektor

Mail

sjpa@food.dtu.dk

Supervisor info

MSc in Bioinformatics and Systems Biology

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

BSc in Biomedical Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

BSc in Biotechnology

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

BSc in Human Life Science Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

BSc in Quantitative biology and disease modelling

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc Eng in Quantitative Biology and Disease Modelling

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Advanced Materials and Health Care Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Biomedical Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Biotechnology

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Chemical and Biochemical Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Environmental Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Food Technology

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

MSc in Pharmaceutical Design and Engineering

Supervisor

Sünje Johanna Pamp

Type

BSc project, MSc thesis

Technical University of Denmark

For almost two centuries DTU, Technical University of Denmark, has been dedicated to fulfilling the vision of H.C. Ørsted – the father of electromagnetism – who founded the university in 1829 to develop and create value using the natural sciences and the technical sciences to benefit society.


Today, DTU is ranked as one of the foremost technical universities in Europe, continues to set new records in the number of publications, and persistently increases and develops our partnerships with industry, and assignments accomplished by DTU’s public sector consultancy.

Find us here

Anker Engelunds Vej 1
Bygning 101A
2800 Kgs. Lyngby

Denmark



Tlf. (+45) 45 25 25 25

CVR-nr. 30 06 09 46

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